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Kipferlia bialata VPS46B

Trepomonas sp. PC1 VPS24L Giardia intestinalis ADH VPS46B Trepomonas sp. PC1 VPS46A

Giardia intestinalis AWB VPS24 Giardia intestinalis ADH VPS46A

Trichomonas vaginalis VPS2A

Giardia intestinalis BGS VPS46B Carpediemonas membranifera VPS46B

Giardia intestinalis AWB VPS24L Giardia intestinalis EP15 VPS46B Giardia intestinalis AWB VPS46B

Kipferlia bialata VPS2A

Monocercomonoides exilis VPS46B

Giardia intestinalis ADH VPS24 Giardia intestinalis EP15 VPS24L

Monocercomonoides exilis VPS46C

Giardia intestinalis AWB VPS46A Naegleria gruberi VPS46

Spironucleus salmonicida VPS46A

Kipferlia bialata VPS24A Carpediemonas membranifera VPS24B

Trichomonas vaginalis VPS46

Carpediemonas membranifera VPS2

Trichomonas vaginalis VPS2B Carpediemonas membranifera VPS46A

Carpediemonas membranifera VPS24A

Monocercomonoides exilis VPS24B Giardia intestinalis BGSB VPS46B Carpediemonas membranifera VPS46C

Naegleria gruberi VPS24 Monocercomonoides exilis VPS46A

Giardia intestinalis BGSB VPS24L Naegleria gruberi VPS2

Giardia intestinalis BGS VPS46A Giardia intestinalis BGSB VPS46A Giardia intestinalis EP15 VPS46A

Monocercomonoides exilis VPS2

Spironucleus salmonicida VPS24L

Giardia intestinalis EP15 VPS24 Trepomonas sp. PC1 VPS46B

Trichomonas vaginalis VPS24 Kipferlia bialata VPS46A

Trichomonas vaginalis VPS2C

Giardia intestinalis BGS VPS24L

Giardia intestinalis ADH VPS24L

Monocercomonoides exilis VPS24A Spironucleus salmonicida VPS46B 0.81/50/-

0.61/26/48 0.87/20/46

0.84/23/74 1.0/100/85

0.99/40/79 0.65/37/47

VPS46

VPS2 VPS24L VPS24

≥ 0.80/50/95

≥ 0.95/75/97

≥ 0.99/95/99 MRBAYES/RAxML/IQTREE

Supplementary Figure 7 Supplementary Figure 5

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Supplementary Figure S1:

Results based on BLASTx hits to protein models from Drosophila melanogaster (Dm), Tribolium castaneum (Tc), Dendroctonus ponderosae (Dp), and Anaplophora glabripennis (Ag)..

Supplementary Figure S2:

Supplementary Figure S2: Dispersion of raw and DESeq2 adjusted read counts about empirical mean for comparisons of triplicate RNA-seq data within A) control maize (Cn; Treatment T7)

Supplementary Figure S3:

Supplementary Figure S3: Gene Ontology (GO) terms enriched among transcripts differentially expressed in Heterorhabditis bacteriophora (Hb) and Metarhizium anisopliae (Ma)

Supplementary Figure S4:

DRONC NRRRIGAEKDSKSLIHLFQELNFTI-FP---YGNVNQDQFFKLLTMVTSSSYVQNTECFVMVLMTHGNSV 56 XP_028140498.1 FPYRNGALVDDANLKALFEQMGGWDLDC---YHNKTALEMIMLIQKFAG-EGKPDYDICCMIIMSHGGEM

Supplementary Figure S5:

Two baculovirus inhibition of apoptosis protein repeat domains (BIR1 and BIR2) and RING finder domains characteristic of IAP family 1 proteins are underlined, and cysteine

Supplementary Figure S7:

Supplementary Figure S7: Orthology of stress-induced endoplasmic reticulum protein 2 (SERP2) encoded by the differentially expressed transcript DIAVI057195 in Diabrotica

Supplementary Figure S1.

[1] Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC (1999) Full-length human immunodeficiency virus type 1 genomes from

Supplementary Figure 2

BSCs plot obtained from an in vivo prostate tumour model pre-and-post 24 hours after USMB and HT treatment.. A representative plot of the measured BSC and its best- fit