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Additional file 4

Phenotype summary plots for DAY_FLW.

Days to Flowering (DAY_FLW)

DAY_FLW by Genotype Index Histogram of DAY_FLW

Boxplot of DAY_FLW Cumulative Distribution of DAY_FLW Days to Flowering

Days to Flowering

Days to Flowering

Days to Flowering Genotype Index

(2)

Phenotype summary plots for DAY_POD_FORM.

Days to Pod Formation (DAY_POD_FORM)

DAY_POD_FORM by Genotype Index Histogram of DAY_POD_FORM

Boxplot of DAY_POD_FORM Days to Pod Formation

Days to Pod Formation

Days to Pod Formation

Days to Pod Formation Genotype Index

Cumulative Distribution of DAY_POD_FORM

(3)

Phenotype summary plots for FLW_CLR.

Flower Colour (FLW_CLR)

FLW_CLR by Genotype Index Histogram of FLW_CLR

Boxplot of FLW_CLR Flower Colour

Flower Colour

Flower Colour Flower Colour Genotype Index

Cumulative Distribution of FLW_CLR

(4)

Phenotype summary plots for Ft_Lss.

Steady-state fluorescence in light intensity (Ft_Lss)

Ft_Lss by Genotype Index Histogram of FT_Lss

Boxplot of Ft_Lss Ft_Lss

Ft_Lss

Ft_Lss Ft_Lss Genotype Index

Cumulative Distribution of Ft_Lss

(5)

Phenotype summary plots for HILM_CLR.

Hilum Colour (HILM_CLR)

HILM_CLR by Genotype Index Histogram of HILM_CLR

Boxplot of HILM_CLR Hilum Colour

Hilum Colour

Hilum Colour Hilum Colour Genotype Index

Cumulative Distribution of HILM_CLR

(6)

Phenotype summary plots for PLT_HGT.

Plant Height (PLT_HGT)

PLT_HGT by Genotype Index Histogram of PLT_HGT

Boxplot of PLT_HGT Plant Height (cm)

Plant Height (cm)

Plant Height (cm) Plant Height (cm) Genotype Index

Cumulative Distribution of PLT_HGT

(7)

Phenotype summary plots for POD_CLR.

Pod Colour (POD_CLR)

POD_CLR by Genotype Index Histogram of POD_CLR

Boxplot of POD_CLR Pod Colour

Pod Colour

Pod Colour Pod Colour Genotype Index

Cumulative Distribution of POD_CLR

(8)

Phenotype summary plots for SED_CLR.

Seed Colour (SED_CLR)

SED_CLR by Genotype Index Histogram of SED_CLR

Boxplot of SED_CLR Seed Colour

Seed Colour

Seed Colour Seed Colour Genotype Index

Cumulative Distribution of SED_CLR

(9)

Phenotype summary plots for SED_WT.

100-Seed Weight (SED_WT)

SED_WT by Genotype Index Histogram of SED_WT

Boxplot of SED_WT 100-Seed Weight (g)

100-Seed Weight (g)

100-Seed Weight (g) 100-Seed Weight (g) Genotype Index

Cumulative Distribution of SED_WT

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