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This formulary contains a brief selection of equations that are commonly used in relation to feed intake, digestibility, diet composition and passage rate estimation procedures.

I = FO 1 AD

where, I is intake; FO is faecal output; and AD is apparent digestibility of DM, OM, energy or proximate nutrients (Dove and Mayes, 2006)

If =

Fi

Fj Dj + Ic × Cj Ic × Ci

HiFi Fj × Hj

where, If is forage intake [kg DM/d] assuming that concentrate intake is known;

Hi, Ci and Fi are concentrations of the plant marker (alkane) i in herbage, concen-trate and faeces, respectively [mg/kg DM]; Hj, Cj and Fj are concentrations of the external marker (synthetic alkane) j in herbage, concentrate and faeces, respec-tively [mg/kg DM]; Ic is the known concentrate intake [kg DM/d]; and Dj is the dosage of j that is externally administered [mg/d] (Mayes et al., 1986).

If = Is × Pf Ps

where, If is forage intake [kg DM/d]; Is is the known supplement intake [kg DM/d];

and Pf and Ps are the respective proportions of forage and supplement in the diet that are estimated using specific marker profiles of the diet components and non-negative least-squares optimization (Equation 11) of marker concentrations in feed and faeces (Dove and Charmley, 2008)

According to Giráldez et al. (2004), intake can be estimated using multi-compartmental model (Dhanoa et al., 1985) parameters obtained from fitting to marker faecal excretion curves (or parameters obtained from fits of alternative models; see Moore-Colyer et al., 2003; Rosenfeld et al., 2006):

FO = 24 ×K ×Dj A

where, FO is faecal output [kg DM/d]; Dj is the single dose of an external marker [mg]; A is a scale parameter (obtained from the multi-compartmental model of Dhanoa et al., 1985); and K is calculated as follows (Giráldez et al., 2004)

(1)

(2)

(3)

(4)

119

K = K1 × K2 × 〈∏ (1+K2)/( i 2 × K2 K1 )

N 1

i = 3

N 2 × (K2 K1)

where, K1 and K2 are estimates of slow and fast fractional outflow rates of digesta;

and N is the quantity of compartments (parameters are obtained from the multi-compartmental model of Dhanoa et al., 1985, or alternative models) (Giráldez et al., 2004)

I = Fj Hi / Fi

where, I is intake [kg DM/d]; Fj is faecal output [kg DM/d] estimated from a single dose of external marker j; and Hi and Fi are internal marker concentrations [mg/kg DM] in forage and faeces, respectively (Giráldez et al., 2004)

AD = I FO I

where, AD is apparent digestibility; I is intake; and FO is the faecal output of DM, OM, energy or proximate nutrients (Dove and Mayes, 2006)

AD = 1 – Di Fi

where, AD is apparent digestibility; and Diand Fi are concentrations of internal marker i in the diet and faeces, respectively (Bergero et al., 2009)

AD = 1 – Di Fi

× Fn Dn

where, AD is apparent digestibility; Di and Fi are concentrations of internal marker i in the diet and faeces, respectively; and Dn and Fn are concentrations of OM, en-ergy or a nutrient n in the diet and faeces, respectively (Bergero et al., 2009)

AD = (a + … + n) – 1 a + … + n

where, a, …, n are the components of a diet; the proportion of these components can be estimated by least-squares optimization as described in Equation 11 (Dove and Mayes, 2006)

(5)

(9) (8) (7) (6)

(10)

120

ni=1 ME 2=

FFi

t

a ×C1a ×C1i t +b ×C2+b ×C2i t +c ×C3+c ×C3i

t

n 2

i=1 min

where, M is the measured faecal proportion of marker i; E is the estimated dietary proportion of i (E = i / t); Fi is the faecal concentration of i; Ft is the concentration of total markers t in faeces; C1i to C3i, and C1t to C3t are concentrations of marker i, respectively total marker concentration t in diet components C1 to C3; and a, b and c are hypothetical intakes of diet components C1 to C3 (Ferreira et al., 2007c)

TMRT h = ti ×ci × ti

ci × ti

where, TMRT is total mean retention time [h] of marker/digesta within the diges-tive tract; ti is the time delay [h] between administration of the marker and the midpoint of the ith collection interval; ci is the marker concentration in the ith faeces sample; and Δti is the time interval [h] between two consecutive sampling times (Thielemans et al., 1978)

TT h = xi ×ti

xi

where, TT is the transit time of a marker [h] throughout the digestive tract; ti is the time delay [h] between administration of the marker and the time of fae-ces/chymus collection; and xi is the marker quantity in each faeces sample (McGreevy et al., 2001; based on Cummings and Wiggins, 1976)

(11)

(13) (12)

121 9.2. Supplementary material

Supplementary material of Article 1

Fig. S1. Interday variation of least squares means of dry matter intake (DMI) estimates based upon the n-nonacosane : n-octacosane alkane pair: A, B and C denote periods fol-lowing meals or bolus administration. Arrows indicate the time of meal presentation or bolus administration.

Fig. S2. Interday variation of least squares means of dry matter output (DMO) estimates based upon the product of single faeces quantity and daily defecation frequency: A, B and C denote feeding periods following meals. Arrows indicate the time of meal presentation.

122

Fig. S3. Interday variation of least squares means of dry matter digestibility (DMD) esti-mates based upon n-nonacosane (C29): A, B and C denote feeding periods following meals. Arrows indicate the time of meal presentation.

123 Supplementary material of Article 3

Fig. S1. Step A of wax preparation: The weighing of one or multiple crystalline alkanes into a vessel. For a better visualization of the wax, the lipophilic pigment Sudan III (Sigma-Aldrich Chemie GmbH, Steinheim, Germany) was added.

124

Fig. S2. Step B of wax preparation: The melting of the alkane or the mixture of multiple alkanes in a water bath.

125

Fig. S3. Step C of wax preparation: The cooling of the molten alkanes at room temperature until formation and hardening of the wax.

Fig. S4. Step D of wax preparation: The crushing of the hardened wax to small fragments.

Eidesstattliche Erklärung / Declaration under oath

Ich erkläre an Eides statt, dass ich die Arbeit selbstständig und ohne fremde Hilfe verfasst, keine anderen als die von mir angegebenen Quellen und Hilfsmittel be-nutzt und die den bebe-nutzten Werken wörtlich oder inhaltlich entnommenen Stel-len als solche kenntlich gemacht habe.

I declare under penalty of perjury that this thesis is my own work entirely and has been written without any help from other people. I used only the sources men-tioned and included all the citations correctly both in word or content.

____________ ________________________________________________

Datum / Date Unterschrift des Antragstellers / Signature of the applicant

Curriculum vitae

Personal data

Name Martin Bachmann

Date of birth 31 May 1985

Place of birth Halle (Saale), Saxony-Anhalt, Germany Personal status unmarried, 2 children

Address (private) Ringstraße 7, Lieskau, 06198 Salzatal, Germany Occupations

Sep 2016 – Dec 2016

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientist at Group Animal Nutrition Jan 2016 – Aug 2016

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientific auxiliary at Group Animal Nutrition Oct 2015 – Jan 2016

Saxon State Office for the Environment, Agriculture and Geology, Department 75 (Animal Husbandry and Animal Feeding), Köllitsch, Germany

Advisor for Animal Feeding Aug 2015 – Oct 2015

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientist at Group Animal Nutrition Jan 2014 – Jul 2015

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientific auxiliary at Group Animal Nutrition Jul 2013 – Sep 2013

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientific auxiliary at Group Animal Nutrition Jan 2013 – Jun 2013

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Scientist at Group Animal Nutrition

Oct 2012 – Dec 2012

Research Centre for Agricultural and Nutritional Sciences Merbitz, Martin Luther University Halle-Wittenberg, Wettin-Löbejün, Germany

Scientific auxiliary Academic education

Since Oct 2012

Institute of Agricultural and Nutritional Sciences, Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Graduation on the subject of: “Methodic investigations on the suitability of plant and synthetic n-alkanes as markers to predict feed intake and digestibility in hors-es”

Nov 2012

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Degree: Master of Science in Agricultural Science (M. Sc. agr.), marked 1.7, thesis on the subject of: “Investigations on the use of IceQube®- and ALT-pedometers for the supervision of mares and cows in the prepartal period”, marked 1.0

Oct 2010 – Nov 2012

Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany

Master study of Agricultural Science / Livestock Science Jun 2010

Faculty of Agricultural Sciences, Georg August University Göttingen, Germany Degree: Bachelor of Science in Agricultural Science (B. Sc. agr.), marked 2.7, thesis on the subject of: “About the training and the use of juvenile racehorses. A litera-ture study to the animal welfare in horse racing sports”, marked 1.3

Oct 2007 – Jun 2010

Faculty of Agricultural Sciences, Georg August University Göttingen, Germany Bachelor study of Agricultural Science

Furtherance

Aug 2013 – Nov 2016

Fellowship given by the H. WILHELM SCHAUMANN STIFTUNG (Foundation), Hamburg, Germany (set out from Aug 2015 – Dec 2015)

06 May 2013

Advancement award given by the Gesellschaft zur Förderung der Wissenschaft um das Pferd e.V. (GWP e.V.), Göttingen, Germany

Publications (peer-reviewed)

Bachmann, M., Wensch-Dorendorf, M., Hoffmann, G., Steinhöfel, I., Bothendorf, S., Kem-per, N., 2013. Einsatzmöglichkeiten von Pedometern zur Überwachung von Kühen im präpartalen Zeitraum. Züchtungskunde 85, 419-429.

Bachmann, M., Wensch-Dorendorf, M., Hoffmann, G., Steinhöfel, I., Bothendorf, S., Kem-per, N., 2014. Pedometers as supervision tools for mares in the prepartal period. Appl.

Anim. Behav. Sci. 151, 51-60.

Bachmann, M., Wensch-Dorendorf, M., Wulf, M., Glatter, M., Siebmann, M., Bierögel, C., Schumann, E., Bulang, M., Aurich, C., Zeyner, A., 2016. Bolus matrix for administration of dietary markers in horses. Livest. Sci. 185, 43-49.

Bachmann, M., Wensch-Dorendorf, M., Mäder, K., Bulang, M., Zeyner, A., 2016. Prepara-tion of synthetic alkane waxes and investigaPrepara-tions on their suitability for applicaPrepara-tion as dietary markers in farm animals. Livest. Sci. 185, 110-116.

Bachmann, M., Wensch-Dorendorf, M., Bulang, M., Zeyner, A., 2016. Impact of dynamics of faecal concentrations of plant and synthetic n-alkanes on their suitability for the es-timation of dry matter intake and apparent digestibility in horses. J. Agr. Sci. 154, 1291-1305.

Glatter, M., Wiedner, K., Hirche, F., Mielenz, N., Hillegeist, D., Bochnia, M., Cehak, A., Bachmann, M., Greef, J. M., Glaser, B., Wolf, P., Breves, G., Zeyner, A., 2016. Fermenta-tion characteristics along the gastrointestinal tract after feeding of Jerusalem artichoke meal to adult healthy Warmblood horses. J. Anim. Nutr. 1, available at http://animal-nutrition.imedpub.com/.

Conference contributions

Bachmann, M., Wensch-Dorendorf, M., Hoffmann, G., Steinhöfel, I., Bothendorf, S., Kem-per, N., 2012. Analyse des Einsatzes von Pedometern zur Überwachung von Kühen und Stuten im präpartalen Zeitraum, in: Proceedings of the Deutsche Gesellschaft für Züch-tungskunde/Gesellschaft für Tierzucht Gemeinschaftstagung, D21. Conference held in Halle (Saale), Germany, 12 – 13 Sep 2012.

Bachmann, M., Wensch-Dorendorf, M., Hoffmann, G., Steinhöfel, I., Bothendorf, S., Kem-per, N., 2013. The use of pedometers as supervision tools for cows and mares in the prepartal period, in: Proceedings of the 16th International Congress in Animal Hygiene, pp. 411-413. Conference held in Nanjing, China, 05 – 09 May 2013.

Bachmann, M., Wensch-Dorendorf, M., Bulang, M., Zeyner, A., 2015. Suitability of plantal n-alkanes for the estimation of dry matter intake and apparent digestibility in horses – pilot study, in: Proceedings of the 69th Conference of the Society of Nutrition Physiolo-gy, p. 25. Conference held in Göttingen, Germany, 10 – 12 Mar 2015.

Glatter, M., Bochnia, M., Bachmann, M., Wiedner, K., Mielenz, N., Breves, G., Zeyner, A., 2015. Einfluss von Topinamburmehl auf das equine gastrointestinale Milieu, in: Pro-ceedings of the Göttinger Pferdetage, p. 131. Conference held in Göttingen, Germany, 10 – 11 Mar 2015.

Glatter, M., Bochnia, M., Bachmann, M., Wiedner, K., Breves, G., Zeyner, A., 2015. Impact of Jerusalem artichoke meal on metabolites of microbial fermentation in the equine gastrointestinal tract, in: Proceedings of the International Scientific Conference on Probiotics and Prebiotics, p. 74. Conference held in Budapest, Hungary, 23 – 25 Jun 2015.

Glatter, M., Borewicz, K., Wiedner, K., Mielenz, N., Bochnia, M., Bachmann, M., Smidt, H., Glaser, B., Breves, G., Zeyner, A., 2015. Feeding of Jerusalem artichoke meal alters the