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AD induces differential expression of mitophagy proteins in murine AECII

4. Results

4.3. Mitophagy in murine model of AD-induced pulmonary fibrosis

4.3.3. AD induces differential expression of mitophagy proteins in murine AECII

56 (Figure 4.6I). Altogether, the data point towards increased mitochondrial biogenesis in AECII following AD treatment.

4.3.3. AD induces differential expression of mitophagy proteins in murine

Results

57 In addition, the expression of conventional macroautophagy proteins, ATG12-ATG5 and ATG7 was also analyzed, as deficiency of these proteins has been proven to induce mitochondrial defects and hinder the clearance of damaged mitochondria (Wu et al., 2009, Liu et al., 2012). Immunoblot analysis of the AD treated mice lung homogenates, murine AECII and MLE12 treated with AD in vitro displayed proficient increase in the expression of ATG12-ATG5 (~ 1.5-fold) in comparison to the Veh treated controls (Figures 4.7A and G, 4.8A and G, 4.9A and G). Similar to AD-induced ATG12-ATG5 expression, immunoblot analysis of AD (day 7, 21 and 28) treated mice lung homogenates exhibited significant upregulation (~ 2-fold) of ATG7 expression versus the Veh (Figures 4.7A and H).

Immunohistochemical analysis for ATG7 and proSP-C (AECII marker) on the serial lung sections revealed an increased staining of ATG7 in AECII in lung sections of AD treated (day 7, 14, 21 and 28) mice compared to the Veh treated (day 28) control mice (Figure 4.7J).

In line with this, in vitro AD treated murine AECII (Figure 4.8A and H) and AD treated MLE12 cells (Figures 4.9A and H) also showed a significant increase (~ 2 and ~ 1.5-fold respectively) in the ATG7 expression after 24 hours.

Thus, these results collectively imply unaltered expression of the mitophagy receptor proteins Bnip3L & Bnip3 and the cargo receptor protein NBR1, but an increased synthesis of autophagy adaptor protein p62 and other mitophagy proteins such as ATG12-ATG5 and ATG7 in murine AECII following AD treatment in vivo and in vitro.

Bnip3 25

35

70 Bnip3L (Homodimer)

55 ATG12- ATG5

70

ATG7

AD D7 AD D14 Veh D28 AD D21 AD D28 Veh D28

MW (kDa)

β-actin 40

Bnip3L (Monomer) 40

100

NBR1

70 p62

A.

58

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin nsIDV % of ß-actin

ns ns ns

Bnip3

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin

ns

IDV % of ß-actin ns

ns ns

Bnip3L - Monomer

AD D7 AD D14 AD D21 AD D28 Veh D28 AD D7

AD D14 AD D21

AD D 28

Veh D28 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin ns ns ns

Bnip3L - Homodimer

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150

IDV % of ß-actin

*

IDV % of ß-actin ns *

**

p62

AD D7 AD D14 AD D21 AD D28 Veh D28

B. C.

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin ns

IDV % of ß-actin

ns

ns ns

Bnip3

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin

ns

IDV % of ß-actin ns

ns ns

Bnip3L - Monomer

AD D7 AD D14 AD D21 AD D28 Veh D28 AD D7

AD D14 AD D21

AD D 28

Veh D28 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin ns ns ns

Bnip3L - Homodimer

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150

IDV % of ß-actin

*

IDV % of ß-actin ns *

**

p62

AD D7 AD D14 AD D21 AD D28 Veh D28

D. E.

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin **IDV % of ß-actin

ns **

*

ATG7

AD D7 AD D14 AD D21 AD D28 Veh D28 AD D7

AD D14 AD D21

AD D 28 Veh D28 0

50 100 150 200

IDV % of ß-actin

*

IDV % of ß-actin

ATG12-ATG5

AD D7 AD D14 AD D21 AD D28 Veh D28

*

*

*

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

20 40 60 80 100

IDV % of ß-actin

*

IDV % of ß-actin ns

*

**

NBR1

AD D7 AD D14 AD D21 AD D28 Veh D28

F. G.

H.

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin **IDV % of ß-actin

ns **

*

ATG7

AD D7 AD D14 AD D21 AD D28 Veh D28 AD D7

AD D14 AD D21

AD D 28 Veh D28 0

50 100 150 200

IDV % of ß-actin

*

IDV % of ß-actin

ATG12-ATG5

AD D7 AD D14 AD D21 AD D28 Veh D28

*

*

*

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

20 40 60 80 100

IDV % of ß-actin *IDV % of ß-actin ns

*

**

NBR1

AD D7 AD D14 AD D21 AD D28 Veh D28

F. G.

H.

Results

59

Figure 4.7. Differential expression of mitophagy proteins in AD treated mice lung tissues.

(A) Western blot analysis of lung homogenates of (left) AD treated mice (day 7, 14) and Veh treated mice (day 28) and (right) AD treated mice (day 21, 28) and Veh treated mice (day 28) for Bnip3L (homodimer and monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7 and -actin (loading control). n = 5 mice per group. (B, C, D, E, F, G, H) Densitometry analysis of the target proteins’ blots namely Bnip3L (homodimer and monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7 and -actin (loading control) and target protein*100/-actin ratio was calculated and represented as bar graphs. **p < 0.01, *p < 0.05, ns - no significance. (I) Immunohistochemical analysis of serial lung sections of AD (day 7, 14, 21 and 28) and Veh (day 28) treated mice for p62 and proSP-C. Arrows indicate AECII showing increased p62 expression from day 7 of AD treatment. n = 5 mice per group. Scale bar = 50 µm. Original magnification: x400 (J) Immunohistochemical analysis of serial lung sections of AD (day 7, 14, 21 and 28) and Veh (day 28) treated mice for ATG7 and proSP-C. Arrows indicate AECII showing increased ATG7 expression from day 7 of AD treatment. n = 5 mice per group. Scale bar = 50 µm. Original magnification: x400.

AD D14 AD D21 AD D28 Veh D28

p62proSP-C

AD D7

I.

AD D14 AD D21 AD D28 Veh D28

ATG 7

AD D7

proSP-C

J.

60

AD Veh

0 20 40 60 80 100

IDV % of ß-actinIDV % of GAPDH

AD Veh BNIP3L- Monomer ns

AD Veh

0 10 20 30

IDV % of ß-actin IDV % of GAPDH

AD Veh Bnip3L- Homodimer

A. ns

C.

B.

ATG12 - ATG5 55

AD Veh

AECII MW

(kDa)

70 ATG7

pro- SP C 25

BNIP3 35

25

p62 70

GAPDH 35

BNIP3L (Monomer) 40

BNIP3L (Homodimer) 70

NBR1 100

AD Veh

0 50 100 150

IDV % of ß-actin **IDV % of GAPDH

AD Veh ATG12-ATG5

AD Veh

0 5 10 15 20 25

IDV % of ß-actin

ns

IDV % of GAPDH

AD Veh NBR1

AD Veh

0 20 40 60 80 100

IDV % of ß-actin

*

IDV % of GAPDH

AD Veh

AD Veh p62

0 10 20 30 40 50

IDV % of ß-actin

ns

IDV % of GAPDH

AD Veh Bnip3

D. E.

F. G.

AD Veh

0 50 100 150

IDV % of ß-actin

**

IDV % of GAPDH

AD Veh ATG12-ATG5

AD Veh

0 5 10 15 20 25

IDV % of ß-actin

ns

IDV % of GAPDH

AD Veh NBR1

AD Veh

0 20 40 60 80 100

IDV % of ß-actin

*

IDV % of GAPDH

AD Veh

AD Veh p62

0 10 20 30 40 50

IDV % of ß-actin

ns

IDV % of GAPDH

AD Veh Bnip3

D. E.

F. G.

Results

61

Figure 4.8. Differential expression of mitophagy proteins in AD treated AECII.

(A) Representative western blot images for Bnip3L (homodimer & monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7, proSP-C and GAPDH (loading control) from 24 hours of AD or Veh treated AECII isolated from C57Bl/6 mice. n = 3 independent experiments. (B, C, D, E, F, G and H) Densitometry analysis of the triplicate blots of the target proteins viz Bnip3L (homodimer & monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7 and GAPDH (loading control) and target protein*100/GAPDH ratio was calculated and represented as bar graphs.

**p < 0.01,*p < 0.05, ns - no significance.

**

IDV % of GAPDH

AD Veh

AD ATG7 Veh

0 10 20 30 40 50

IDV % of ß-actin

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150 200

IDV % of ß-actin

ns

IDV % of ß-actin ns

ns ns

Bnip3L - Monomer

AD D7 AD D14 AD D21 AD D28 Veh D28 AD D7

AD D14 AD D21

AD D 28 Veh D28 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin ns ns ns

Bnip3L - Homodimer

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150

IDV % of ß-actin

*

IDV % of ß-actin ns *

**

p62

AD D7 AD D14 AD D21 AD D28 Veh D28

H. E.

AD 8h

AD 16h

AD 24h

Veh D24 0

50 100 150

IDV % of ß-actin nsIDV % of ß-actin

AD 8h AD 16h AD 24h Veh 24h Bnip3L - Monomer

ns

ns AD 8h

AD 16h

AD 24h

Veh D24 0

10 20 30 40

IDV % of ß-actin

ns IDV % of ß-actin

AD 8h AD 16h AD 24h Veh 24h Bnip3L - Homodimer

ns

ns

A.

C.

B.

55

ATG 12- ATG5 AD

8 16 24 24 MW (kDa)

Veh MLE12

Hours

70 ATG7

β-actin 40

35

25 Bnip3

NBR1 100

40 Bnip3L

(Monomer)

70 Bnip3L (Homodimer)

70

p62

62

Figure 4.9. Differential expression of mitophagy proteins in AD treated MLE12 cells.

(A) Representative western blot images for Bnip3L (homodimer & monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7, proSP-C and -actin (loading control) from AD (8, 16 and 24 hours) and Veh (24 hours) treated MLE12 cells. n = 3 independent experiments. (B, C, D, E, F, G and H) Densitometry analysis of the triplicate blots of the target proteins viz Bnip3L (homodimer & monomer), Bnip3, p62, NBR1, ATG12-ATG5, ATG7 and

-actin (loading control) and target protein*100/-actin ratio was calculated and represented as bar graphs. **p

< 0.01,*p < 0.05, ns - no significance.

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60 80 100

IDV % of ß-actin

*

IDV % of ß-actin

ATG12 - ATG5

AD 8h AD 16h AD 24h Veh 24h

* *

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60

IDV % of ß-actin

ns

IDV % of ß-actin

*

NBR1

AD 8h AD 16h AD 24h Veh 24h ns

ns

AD 8h

AD 16h

AD 24h

Veh D24 0

50 100 150

IDV % of ß-actin **IDV % of ß-actin

*

p62

AD 8h AD 16h AD 24h Veh 24h

**

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin

AD 8h AD 16h AD 24h Veh 24h Bniip3

ns ns

D. E.

F. G.

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60 80 100

IDV % of ß-actin

*

IDV % of ß-actin

ATG12 - ATG5

AD 8h AD 16h AD 24h Veh 24h

* *

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60

IDV % of ß-actin

ns

IDV % of ß-actin

*

NBR1

AD 8h AD 16h AD 24h Veh 24h ns

ns

AD 8h

AD 16h

AD 24h

Veh D24 0

50 100 150

IDV % of ß-actin **IDV % of ß-actin

*

p62

AD 8h AD 16h AD 24h Veh 24h

**

AD 8h

AD 16h

AD 24h

Veh D24 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin

AD 8h AD 16h AD 24h Veh 24h Bniip3

ns ns

D. E.

F. G.

AD 8h

AD 16h

AD 24h

Veh D24 0

50 100 150 200

IDV % of ß-actin

ns

IDV % of ß-actin

*

ATG7

AD 8h AD 16h AD 24h Veh 24h ns

AD D7

AD D14 AD D21

AD D 28

Veh D28 0

20 40 60 80

IDV % of ß-actin

ns

IDV % of ß-actin ns ns ns

Bnip3L - Homodimer

AD D7 AD D14 AD D21 AD D28 Veh D28

AD D7 AD D14

AD D21 AD D 28

Veh D28 0

50 100 150

IDV % of ß-actin

*

IDV % of ß-actin ns *

**

p62

AD D7 AD D14 AD D21 AD D28 Veh D28

H. E.

Results

63

4.3.4. AD initiates mitophagy via lysine 63-linked ubiquitin chains and p62 in