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1.1 Biological background

1.1.2 Activation of GPCRs

Before G protein or arrestin can bind to a GPCR, the receptor needs to be activated, a process involving major structural changes. A hall-mark of receptor activation is the outward tilt of transmembrane helix 6(TM6). First identified by pioneering EPR work on the retinal pho-toreceptor rhodopsin [28,29], the TM6movement has been confirmed by an array of R* structures, obtained by X-ray crystallography for rhodopsin [30, 31], the β2-adrenoceptor [32] and the muscarinic M2 receptor [33]. These R* structures have undergone significant struc-tural changes compared to the inactive R structures and bind ago-nistic ligands, G protein, fragments of the Gα-subunit or nanobodies (see ref [34]). In addition to the TM6movement, changes to TM5, com-prising helix elongation and rigid body movements, are observed in the crystal structures of R* in complex with Gα or parts thereof [31, 32]. Together, these major structural rearrangements result in the for-mation of a open intracellular binding crevice. The helix movements involve a number of microswitches of highly conserved residues and motifs [1]. One of them is the arginine from the conserved E(D)R3.50Y motif1, which is buried in the inactive receptor state but gets exposed in the active state where it forms the floor of the created binding crevice (Figure2). Stabilization of the inactive receptor is facilitated by the hydrogen bond network of deprotonated E3.49, R3.50and E6.30 tethering TM3 and TM6 together [36, 37, 38]. Upon receptor

activa-1 R135 in rhodopsin or generally R3.50, utilizing the Ballesteros-Weinstein scheme where the most conserved residue in each TM among GPCRs is designated x.50, where x is the TM number and .50is used for reference. Other residues on the same TM are numbered relative to the x.50residue [35].

Figure 2:GPCR activation requires major structural changes and a series of microswitches involving conserved residues. (A) Comparison of inactive rhodopsin (blue) and active rhodopsin (red). Upon activation, TM6 tilts outwards and the hydrogen bond network involving E134, R135and E247 is broken, resulting in an open intracellular crevice at the receptor surface.

Side-view showing the major structural changes in the helical bundle of rhodopsin (B) and β2-adrenoceptor (C) crystal structures upon activation.

Note the large outward tilt of TM6 by a rigid body movement of the helix (yellow arrow), distinguishing the inactive and active receptor states. The crystal structures shown are RhR [39] (blue), RhR* [30](red),β2AR [40] (dark green) andβ2AR* [32] (light green).

tion, proton uptake by E3.49 disrupts this network allowing the new R3.50 conformation.

Rhodopsin, while an archetype of class A GPCRs, is also a spe-cial case as it features a covalently bound light-sensitive ligand reti-nal, attached via a Schiff base linkage. Retinal tightly controls the transition/switch from inactive (RhR) to active (RhR*) rhodopsin. In contrast to the diffusible ligands employed by other GPCRs, retinal serves a dual role. In its11-cisform it acts as a strong inverse agonist but the absorption of a photon induces the isomerization of retinal into its all-trans form, which is a potent agonist for rhodopsin. This isomerization puts structural stress on the retinal binding pocket to which the receptor reacts by relaxing into (photo)intermediate states (batho-, lumirhodopsin), which eventually lead to receptor activa-tion [41,42]. By light activation, the receptor leaves its inactive dark state and enters an equilibrium of so-called metarhodopsin states (MI, MIIa, MIIb, MIIbH+, Scheme1), of which the last (MIIbH+) can cou-ple productively to G. Formation of the active MIIbH+ state is

ac-1.1 biological background 5 companied by the protonation of D134(D3.49) [36]. Already during the transition to MIIb, the hydrogen bond network between R135and D247 is disturbed, severing the ties between TM3 (R135) and TM6 (D247), a prerequisite for TM6 outward movement [43]. Once acti-vated, rhodopsin can in turn activate up to103G proteins per second and more under optimal conditions [44]. Eventually, the Schiff base linking retinal to rhodopsin is hydrolyzed andall-trans retinal leaves through a hydrophobic channel [45,46]. This newly formed apopro-tein opsin exists in an equilibrium of active (Ops*) and inactive (Ops) states.

RhR

v

Ñ bathoÑlumiÑMIéMIIaéMIIbéMIIbH+ Scheme1:Rhodopsin activation scheme. After RhR absorbs light (v), the photointermediates batho- and lumirhodopsin (batho, lumi) are transiently traversed to culminate in the coupled equilibria of metarhodopsin states (MI, MIIa, MIIb, MIIbH+)

In contrast to rhodopsin, most other GPCRs like theβ2 -adrenocep-tor show considerable constitutive activity [47] and the process that leads to receptor activation is not known in the detail to which the metarhodopsin states have been elucidated. However, experimental data suggests that non-rhodopsin GPCRs have structural equivalents to the metarhodopsin and opsin states [1, 48, 49]. Thus, after the photoactivation of rhodopsin is completed, retinal acts similar to the more common diffusible ligands that bind to other GPCRs for exam-ple to the β2-adrenoceptor. The crucial protonation event of D3.49, known from rhodopsin, has also been shown for the β2 -adrenocep-tor [50] as well as for the α1B-adrenergic receptor [51]. This proto-nated species constitutes the active receptor: MIIbH+ in the context of metarhodopsin states but generally referred to as R* or specifically as RhR* and β2AR* for active rhodopsin and β2-adrenoceptor, re-spectively.

It is important to note that the active receptor R* at the end of the activation process by no means exhibits a globally fixed or rigid struc-ture, as being an endpoint may suggest or as one might be inclined to deduce from the respective crystal structures. For example, loop motions generally can happen within nanoseconds and larger collec-tive motions can already occur on the microsecond timescale [52].

So, while the rigid body movement of TM6is a major distinguishing feature of the inactive and active receptor states, it does not imply that TM6 (or specifically its intracellular extension) remains at a sin-gle position in the active state. There are additional changes at the conserved NP7.50xxY motif and TM5observed during the activation process that are crucial for the conformational change of TM6[1,53, 54]. Thus the TM6 outward tilt is not the sole determinant for acti-vation nor does TM6exhibit a purely switch-like behavior. But TM6

seems to exist in a spectrum of outward tilts even after activation.

X-ray crystallography and spectroscopic studies suggest that an intra-cellular binding partner is required to restrict the TM6ensemble to a single conformation [31,32,33,27,55,56].