• Keine Ergebnisse gefunden

Supplementary Fig. S1. Phylogenetic tree of 16S rRNA gene sequences generated by using two methods [neighbour-joining (NJ) and maximum- likelihood (ML)], showing the relationships of strains YIM 48771

N/A
N/A
Protected

Academic year: 2022

Aktie "Supplementary Fig. S1. Phylogenetic tree of 16S rRNA gene sequences generated by using two methods [neighbour-joining (NJ) and maximum- likelihood (ML)], showing the relationships of strains YIM 48771"

Copied!
2
0
0

Wird geladen.... (Jetzt Volltext ansehen)

Volltext

(1)

Streptosporangium vulgareDSM 43802T(X89955) Streptosporangium roseumDSM 43021T(X89947) Streptosporangium albumDSM 43023T(X89934)

Streptosporangium longisporumDSM 43180T(X89944) Planomonospora albaJCM 9373T(AB062381)

Planomonospora parontospora subsp.antibioticaJCM 3094T(AB028653)

Planomonospora sphaericaJCM 9374T(AB062382) Planomonospora venezuelensisJCM 3167T(AB028655)

Nonomuraea dietziaeDSM 44320T(AJ278220) Nonomuraea salmoneaDSM 43678T(X97892)

Nonomuraea bangladeshensis5-10-10T(AB274966)

Nonomuraea turkmeniacaDSM 43926T(AF277201)

Nonomuraea polychromeNBRC 14345T(U48977)

Nonomuraea helvataNBRC 14681T(U48975)

Nonomuraea angiosporaNBRC 13155T(U48843)

Nonomuraea spiralisNBRC 14093T(U48983)

Sphaerisporangium albumYIM 48782T(EU499344)

Sphaerisporangium rubeum3D-72(35)T(AB208718)

Sphaerisporangium cinnabarinumDSM 44094T(X89939)

Sphaerisporangium flaviroseumYIM 48771T(EU499338) Sphaerisporangium melleum3-28(8)T(AB208714)

Sphaerisporangium viridialbumDSM 43801T(X89953)

Microtetraspora malaysiensisH47-7T(AB062383)

Microtetraspora glaucaDSM 43311T(X97891)

Microbispora rosea subsp.roseaNBRC 14044T(D86936) Microbispora rosea subsp.aerateATCC 15448T(U48984)

Planotetraspora silvaticaTT 00-51T(AB112082) Planotetraspora miraNBRC 15435T(D85496)

Streptosporangium claviformeDSM 44127T(X89940) Herbidospora cretaceaNBRC 15474T(D85485)

Acrocarpospora corrugataDSM 43316T(X89941)

Acrocarpospora macrocephalaNBRC 16266T(AB025318) 99/613

100/993

100/1000 99/973

100/1000

100/937 95/828

86/617

71/786 59/-

96/948 71/704 73/714 64/522

64/685 90/780 58/-

94/949 93/937

79/549

91/811 77/558 97/802

85/-

77/656 80/734 65/674

98/892 51/676

0.005

(2)

Supplementary Fig. S1. Phylogenetic tree of 16S rRNA gene sequences generated by using two methods [neighbour-joining (NJ) and maximum- likelihood (ML)], showing the relationships of strains YIM 48771

T

, YIM 48782

T

and representative species of other genera (Planomonospora, Nonomuraea, Microtetraspora, Planotetraspora, Herbidospora,

Streptosporangium) (Chun et al., 2X007) of the family Streptosporangiaceae.

Numbers (NJ/ ML) on branch nodes are bootstrap percentages (1000 resamplings, only values over 50 %/500 are given) for NJ and ML analyses.

Bar, 0.5 % sequence divergence.

Reference

Chun, J., Lee, J.-H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W.

(2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259–2261.

Cao, Y.-R., Jiang, Y., Xu, L.-H. & Jiang, C.-L. (2009). Sphaerisporangium

flaviroseum sp. nov. and Sphaerisporangium album sp. nov., isolated from forest

soil in China. Int J Syst Evol Microbiol 59, 1679–1684.

Referenzen

ÄHNLICHE DOKUMENTE

For more realistic durations of cross-protection and larger values of ρ, cross-immunity alone cannot prevent branching events and suppression of the second mutant occurs only if

This paper discusses the effect of Taxus cell cultures on the 18S rRNA gene sequences based on the phylogenetic analysis of cultured T.. chinensis cells and

This paper discusses the effect of Taxus cell cultures on the 18S rRNA gene sequences based on the phylogenetic analysis of cultured T.. chinensis cells and

FIG 2 Maximum likelihood phylogenetic tree based on the core genome (nucleotidic sequences) showing the evolutionary relationship among 75 isolates of Staphylococcus aureus (all

This improved predictive power especially for the aminoglycoside spectinomycin (blue point), where some of our candidate predictors had no effect on MIC (see Figure S6 and

Zardoya R, Meyer A (1996a) The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative

Amplification success was 100% for 16S in a subset of fresh and well-preserved samples of Madagascan frogs, while various combination of COI primers had lower success rates.COI

Best scoring Maximum Likelihood tree for the cox1-bc dataset of West Mediterranean Ditomina.. The ML tree was selected with 100 independent searches, and bootstrap values