Immunoproteasome subunit deficiency has no influence on the canonical pathway of NF- B activation
Annegret Bitzer
a, Michael Basler
a,b, Daniel Krappmann
c, Marcus Groettrup
a,b,∗aDivisionofImmunology,DepartmentofBiology,UniversityofKonstanz,D-78457Konstanz,Germany
bBiotechnologyInstituteThurgau(BITg)attheUniversityofKonstanz,CH-8280Kreuzlingen,Switzerland
cResearchUnitCellularSignalIntegration,InstituteofMolecularToxicologyandPharmacology,HelmholtzZentrumMünchen–GermanResearchCenter forEnvironmentalHealth,IngolstädterLandstr.1,D-85764Neuherberg,Germany
a r t i c l e i n f o
Keywords:
NF-B
Immunoproteasome LMP2
LMP7 Inflammation
a b s t r a c t
Activationofthepro-inflammatorytranscriptionfactorNF-Brequiressignal-induced proteasomal degradationoftheinhibitorofNF-B(IB)inordertoallow nucleartranslocation.Mostcelltypes arecapableofexpressingtwotypesof20Sproteasomecoreparticles,theconstitutiveproteasomeand immunoproteasome.Inducibleunderinflammatoryconditions,theimmunoproteasomeismainlychar- acterizedthroughanalteredcleavagespecificitycomparedtotheconstitutiveproteasome.However,the questionwhetherimmunoproteasomesubunitsaffectNF-Bsignaltransductiondifferentlyfromconsti- tutivesubunitsisstillupfordebate.TostudytheeffectofimmunoproteasomesonLPS-orTNF-␣-induced NF-Bactivation,weusedIFN-␥stimulatedperitonealmacrophagesandmouseembryonicfibroblasts derivedfrommicedeficientfortheimmunoproteasomesubunitslowmolecularmasspolypeptide(LMP) 2,orLMP7andmulticatalyticendopeptidasecomplex-like1(MECL-1).Alongthecanonicalsignaling pathwayofNF-BactivationnodifferencesintheextentandkineticofIBdegradationwereobserved.
NeitherthenucleartranslocationandDNAbindingofNF-BnortheproductionoftheNF-Bdependent cytokinesTNF-␣,IL-6,andIL-10differedbetweenimmunoproteasomedeficientandproficientcells.
Hence,weconcludethatimmunoproteasomesubunitshavenospecializedfunctionforcanonicalNF-B activation.
1. Introduction
NuclearfactorkappaB(NF-B)isacentralpro-inflammatory transcriptionfactor,whichisubiquitouslyexpressedandamas- terswitchbetweeninitiationandmaintenanceofinflammation.As such,NF-Bcontrolsexpressionofalargenumberofimmunoreg- ulatoryproteinslikecytokines,chemokinesandtheirreceptors,as wellasregulatorsofapoptosisandproliferation(Pahl,1999).In unstimulatedcells,NF-Bissequesteredinthecytoplasmasitis boundtoinhibitorsofB(IBs)(Hinzetal.,2012).Extensivesignal transductioncascadesintegrateextracellularand/orintracellular signalsultimatelyleadingtophosphorylation,polyubiquitylation, andproteasomaldegradationofIBs(HaydenandGhosh,2008).
FreeNF-Bthenmigratesintothenucleuswhereitbindstocon- sensussitesinpromotorsofnumerousgenes(Brasier,2006).
∗Correspondingauthorat:DivisionofImmunology,DepartmentofBiology,Uni- versityofKonstanz,Universitaetsstrasse10,D-78457,Konstanz,Germany.
E-mailaddress:Marcus.Groettrup@uni-konstanz.de(M.Groettrup).
NF-B signaling can be subdivided into two distinct path- ways,i.e.thecanonicalandnoncanoncial/alternativepathway.The canonicalpathwaycanbeactivatedbyavarietyofsignalsinclud- ingcytokines,pathogens,stresssignals,andradiation.Generally, receptorproximalsignalingadaptermoleculesinitiateasignaling cascadeultimatelyleadingtoakeystepinthecanonicalNF-B signalingpathway,theactivationoftheinhibitorBkinase(IKK) complex(HaydenandGhosh,2008).Onceactivated,theIKKcom- plexphosphorylatesIB␣,whichissubsequentlymodified with ubiquitinbytheSCF--TrCPcomplexanddegradedbytheprotea- some(KanarekandBen-Neriah,2012).
SincedegradationofIB␣isanessentialstepinNF-Bactiva- tion,theproteasomecomplexisakeyplayerinNF-Bsignaling.
Structurally, the 20S proteasome core particle consists of four stackedrings,eachconsistingofsevensubunits.Whiletheouter ringscontaincatalyticallyinactivealphasubunits,theinnerrings containsevendifferentbetasubunits,threeofwhichdisplayN- terminalthreonineproteaseactivity(1,2,5)(Tanaka,1998).
CellsofhematopoieticoriginandcellsstimulatedwithIFN-␥or, toa lesserextent,withtype Iinterferonsexpressanadditional
Konstanzer Online-Publikations-System (KOPS) URL: http://nbn-resolving.de/urn:nbn:de:bsz:352-g7s5l3w4p0dj7 Erschienen in: Molecular Immunology ; 83 (2017). - S. 147-153
https://dx.doi.org/10.1016/j.molimm.2017.01.019
set of catalytically active proteasome subunits: low molecular masspolypeptide2(LMP2or1i),multicatalyticendopeptidase complex-like1(MECL-1, or2i),and LMP7(5i)(Barton etal., 2002;Khanetal.,2001;Shinetal.,2006).Duringdenovosynthe- sisofproteasomes,thesesubunitsareincorporatedandformthe immunoproteasome,whereasincorporation ofconstitutive sub- unitsis proportionally reduced (Griffinet al., 1998).Compared totheconstitutiveproteasome,theimmunoproteasomeismainly characterizedby an altered cleavage specificity (Driscoll et al., 1993; Gaczynska et al., 1994; Van Kaer et al., 1994). Overall, immunoproteasomesproducemorepeptideswithahydrophobic C-terminus,whicharewellsuitableforthepresentationonMHC classImolecules(Strehletal.,2005;Toesetal.,2001).
BesidesshapingtheimmunopeptidomepresentedonMHCclass Imolecules,severalstudiessupportabroaderimmunologicalrole oftheimmunoproteasome(Groettrupetal.,2010).Micedeficient foranyoftheimmunoproteasomesubunitsareprotectedfromdex- transulphatesodium-inducedcolitis(Basleretal.,2010;Fitzpatrick etal.,2006;Schmidtetal.,2010).Moreover,inhibitionofLMP7 hasbeenproveneffectiveforthetreatmentofautoimmunecondi- tionsindifferentmousemodels(Basleretal.,2015)andattenuates LCMV-inducedmeningitis(Mundtetal.,2016).However,inhibi- tionofthechymotrypsin-likeactivityinhematopoieticcellsrather thanthecatalyticspecificityofLMP7seemstobetheunderlying mechanisminthesemodels(Basleretal.,2014).Nevertheless,the mechanismbywhichLMP7deficiencyinfluencesimmuneregula- torymechanismsisstillnotfullyunderstood.Ultimatelydepending onthe proteasome for activation, NF-B is an important tran- scriptionfactorininflammatoryconditions.Still,previousstudies concernedwiththeeffectofimmunoproteasomesubunitsonNF-
Bactivationyieldedcontradictoryresults(HayashiandFaustman, 2000,1999;Hensleyetal.,2010;Kessleretal.,2000;Maldonado etal.,2013;Visekrunaetal.,2006).
Inthisstudy,wehaverevisitedtheinfluenceofLMP2knock- outandLMP7/MECL-1doubleknockout(L7M)onNF-Bactivation along thecanonical signalingpathway. Peritoneal macrophages andmouseembryonicfibroblasts(MEFs)derivedfromknockout mice were stimulated with LPS or TNF-␣ and IB␣ degrada- tion,cytokinesecretion,andnucleartranslocationofNF-Bwere assessed.Wefoundnoinfluenceofimmunoproteasomesubunit deficiencyonanyoftheseparametersandthereforeproposeNF-B signalingtobeindependentofproteasomesubunitcomposition.
2. Materialandmethods 2.1. Mice,celllinesandcytokines
C57BL/6mice(H-2b)wereoriginallypurchasedfromCharles River.LMP2(VanKaeretal.,1994),LMP7(Fehlingetal.,1994), andMECL-1(Basleretal.,2006)gene-targetedmicewereprovided byJ.Monaco(Cincinnati,OH,USA).LMP7−/−/MECL-1−/− double deficientmice(L7M−/−)weregeneratedbycrossingtheF1gen- erationofLMP7−/−xMECL-1−/−mice.Micewerekeptinaspecific pathogen-freefacilityandusedat8–12weeksofage.Animalexper- imentswereapprovedbythereviewboardofRegierungspr ¨asidium Freiburg.Peritonealmacrophagesandprimarymouseembryonic fibroblasts(MEFs)wereculturedinDMEMwithGlutaMAXsupple- mentedwith10%FCSand100U/mlpenicillin/streptomycin.Media andsupplementswerepurchasedfromInvitrogen-LifeTechnolo- gies.RecombinantmurineIFN-␥andTNF-␣waspurchasedfrom Peprotechandusedat200U/mland100U/ml,respectively.
2.2. Generationofperitonealmacrophagesandmouseembryonic fibroblasts(MEFs)
Peritoneal macrophages were generated by i.p. injection of 0.5ml3%thioglycolatebroth.After4days,cellswerewashedout oftheabdominalcavitybyperitoneallavageusingPBS.Cellswere platedovernightandadherentcellswerefurtherculturedinthe presenceofIFN-␥for2daysorleftuntreated.
MEFs were prepared from embryos onday 14 of gestation.
After removal of head and liver, embryos were finely minced anddigestedintrypsin/EDTAsolution(Invitrogen-LifeTechnolo- gies) for 15min at 37◦C. Trypsin was inactivated withculture mediumandremovedbycentrifugation.Cellswerepassedthrough a100mfilterandplatedfortwodaysat37◦Cand5%CO2.Aliquots ofcellswerestoredat−150◦Candadifferentbatchofcellswas usedforeachreplicationofanexperiment.
2.3. Stimulationofcells
Peritoneal macrophages or MEFs were seeded into 12-well platesandstimulatedwith200U/mlIFN-␥fortwodaystoinduce immunoproteasomeexpression.Controlcellswereleftuntreated.
Cells were then stimulated with 100U/ml TNF-␣ or 200ng/ml LPSandharvestedafterdifferenttimepoints.Cellswerewashed withcoldPBS andusedfor SDS-PAGEand westernblot, EMSA, or TransAM NF-BELISA. Cells used for expression analysis of immunoproteasomesubunitsweredirectlyharvestedafterIFN-␥
treatment.Theproteinconcentrationofsampleswasdetermined usingDCproteinassay(Bio-Rad)accordingtothemanufacturer’s instruction.
Toanalyzecytokinesecretionperitonealmacrophagesstimu- latedwith200U/mlIFN-␥ for 2days wereseededinto 96-well plates. Two hours after seeding, cells were stimulated with 200ng/mlLPSorleftuntreated.Supernatantsoftriplicateswere collected24hlaterandanalyzedusingIL-6,TNF-␣,orIL-10ELISA accordingtothemanufacturer’sinstruction(ebiosciences).
2.4. SDSPAGEandwesternblot
CellswerelysedinRIPAbuffer(150mMNaCl,50mMTrispH8, 1%(v/v)TritonX-100,0.5%(v/v)sodiumdesoxycholate,0.1%(w/v) SDS)includingproteaseinhibitors(cOmpleteEDTA-free,Roche)for 30minonice.Lysateswerecentrifugedat14,000rpmfor15min andsupernatantswereboiledwithSDSsamplebufferfor5min at95◦C.ProteinswereseparatedbySDS-PAGEandblottedonto nitrocellulosemembranes(Whatman).AfterblockinginRoti-Block solution(Roth)for1hatroomtemperature,membraneswereincu- batedwithprimaryantibodiesat4◦Covernight.Membraneswere washed and incubated withappropriate peroxidase-conjugated secondaryantibodies(Dako)for2hatroomtemperature.Mem- branes were washed again and proteins were visualized with enhancedchemiluminescence.Primaryantibodiesusedwere:anti- LMP7andanti-LMP2(Kremeretal.,2010),anti-5(D1H6B,Cell SignalingTechnology),anti-1(cloneE1K90,CellSignalingTech- nology),anti-␣1(cloneIB5,K.Scherrer,Paris,France),anti-IB␣ (clone L35A5, Cell Signaling Technology), anti-␣-tubulin (clone AA13,Sigma).
2.5. Electrophoreticmobilityshiftassay(EMSA)
Nuclear extracts prepared from MEFs were used for EMSA.
MEFswerelysedinhypotoniclysisbuffer(10mMHEPESpH7.9, 10mMKCl,0.1mMEDTA)includingproteaseinhibitors(cOmplete EDTA-free,Roche)andphosphataseinhibitors(PhosSTOP,Roche) for10minonice.NP-40wasaddedtoreachafinalconcentration of0.2%.Lysateswerevortexedandcentrifugedat13,000rpmand
4◦Cfor20s.Pelletscontainingthenuclearfractionwerelysedin nuclearextractionbuffer(20mMHEPESpH7.9,10%(v/v)glycerol, 0.4MNaCl,1mMEGTA,0.1mMEDTA)includingphosphataseand proteaseinhibitorsfor 30minonice.Nuclear lysateswerecen- trifugedat14,000rpmand4◦Cfor14min.Theproteincontentof supernatantswasdeterminedwithaDCproteinassay(Bio-Rad) andfurtherusedforshiftassays.ToensureequalloadingofEMSA reactions,aliquotsofnuclearlysateswereboiledwithSDSsample bufferfor5minat95◦CandsubjectedtoSDS-PAGEandwestern blotusinganti-LaminA/Cantibody.
EMSAwasperformedusinga32P-labeleddouble-strandedDNA probe containingtheNF-Bbindingsite fromthemouseH–2K promotor (5-CAGGGCTGGGGATTCCCCATCTCCACAGG-3). Com- plementaryoligonucleotidescontaining5GATCoverhangswere mixedinannealingbuffer(50mMTrispH8,70mMNaCl)atacon- centrationof200ng/ml,incubatedat90◦Cfor10minandslowly cooleddowntoallowoligonucleotideannealing.Oligonucleotides were then radioactively labeled with dATP[␣-32P] using DNA polymeraseIKlenowfragment(NEB)accordingtothemanufac- turer´ısinstructions.LabeledprobeswerepurifiedusingQIAquick nucleotideremovalkit(Qiagen).Shiftreactions(20l)contained 5gnuclearextracts,0.5gBSA,5mM DTT,0.1g/lpoly(dI- dC) (Affymetrix)and0.5ng probein shiftbuffer(20mMHEPES pH7.9,60mMKCL,4%Ficoll)andwereincubatedfor30minat roomtemperature.Thecomplexeswereseparatedona5%native polyacrylamidegelinTBEbuffer(100mMTris,90mMboricacid, 1mMEDTA,pH8.2).Gelswerevacuum-driedontowhatmanpaper, exposedtophosphorscreens,andthebandswerevisualizedusing aphosphorimager.
2.6. NF-BELISA
TheDNA-bindingactivityofp65innuclearextractsprepared from stimulated MEFs was measured using a TransAM® NF-
BfamilyELISA kit(Active Motif)followingthemanufacturer’s instruction.Allsampleswereanalyzedinduplicatesusing10g proteinperwell.
2.7. Statisticalanalysis
Theunpairedtwo-tailedStudent‘sttestandtwo-wayANOVA with Tukey correction were used for statistical analysis using GraphPadPrismsoftware.
3. Results
3.1. Proteasomesubunitcompositioninperitonealmacrophages andMEFs
Asanapproachforassessingtheinfluenceofimmunoprotea- somesubunitsonNF-Bactivationtwodifferenttypesofprimary cells were isolatedfrom wildtype, LMP7−/−/MECL-1−/− double knockout mice (L7M−/−), and LMP2−/− mice. Thioglycollate- elicited peritonealmacrophages (pMs) and mouse embryonic fibroblasts(MEFs)werechoseninordertoincludecelltypesofthe hematopoieticandnon-hematopoieticlineage,respectively. Iso- latedpMswereculturedinthepresenceofIFN-␥fortwodays tofurtherupregulateimmunoproteasomeexpression.Thesubunit compositionwasthenanalyzedwithSDS-PAGEandwesternblot (Fig.1A).UnstimulatedwildtypepMsstronglyexpressLMP7, whichappearsnottobefurtherupregulatedafterstimulationwith IFN-␥.Incontrast,expressionofLMP2isratherlowinunstimu- latedcellsandisstronglyinducedafterstimulation.Theseresults indicatethataproportionofproteasomesinunstimulatedpMs hasamixedsubunitcompositionconsistingofLMP7togetherwith theconstitutivesubunits1and2.Thisisinaccordance with
Fig.1.Proteasomesubunitcompositioninperitonealmacrophages(pMs)and mouseembryonicfibroblasts(MEFs).pMs(A)orMEFs(B)isolatedfromC57BL/6, LMP7−/−MECL-1−/−(L7M−/−),andLMP2−/−micewereculturedinthepresenceof 200U/mlIFN-␥for2daysorleftuntreated.Wholecelllysateswerepreparedand analyzedbywesternblotting.Thecatalyticallyinactiveproteasomesubunit␣1(iota) wasusedasloadingcontrol.Oneoutofthreeindependentexperimentswithsimilar outcomeisshown.
datapublishedbyGuillaumeetal.,whofoundabout40%ofprotea- somespresentindendriticcellstohaveincorporatedonlyLMP7 butnotLMP2orMECL-1(Guillaumeetal.,2010).Afterstimulation, thesubunit composition shiftsfurther towardsimmunoprotea- somes.However,expressionofMECL-1and2wasnottestedand itisthereforenotpossibletodiscriminatetheproportionoffull immunoproteasomesandcomplexescontainingLMP7andLMP2 togetherwith 2. In agreementwithpreviousreports, L7M−/−
pMsshowastronglyreducedincorporationofLMP2andanaccu- mulationoftheunprocessedLMP2precursor(Griffinetal.,1998;
Deetal.,2003).Hence,L7M−/−pMalmostexclusivelyexpress constitutiveproteasomes.Incontrast,LMP2−/−cells showLMP7 expressionlevelssimilartowildtypecells.
UnlikepMs,MEFsdonotexpressimmunoproteasomesub- units inthe absenceof IFN-␥ stimulation(Fig.1B). AfterIFN-␥ stimulation,expressionofLMP7andLMP2isinduced,whilethe respectiveconstitutive subunits 5 and 1 are downregulated.
SimilartopMs,L7M−/−MEFsdisplaystronglyreducedincorpo- rationofLMP2,whereasLMP2−/−MEFsshowreducedexpression ofLMP7.
3.2. DegradationofIB˛isnotalteredin immunoproteasome-deficientcells
AfterhavinganalyzedtheproteasomecompositioninpMs andMEFs,stimulus-induceddegradationofIB␣wasinvestigated next.Atthispoint,theproteasomeisdirectlyinvolvedinthesig- nalingcascade.IncompleteordelayeddegradationofIB␣leadsto
Fig.2. Stimulus-induceddegradationofIB␣inpMsandMEFs.pMs(AandB)orMEFs(C)isolatedfromC57BL/6,L7M−/−,andLMP2−/−micewereculturedinthe presenceof200U/mlIFN-␥for2days.Cellswerethenstimulatedwith200ng/mlLPS(A)or100U/mlTNF-␣(BandC).Wholecelllysateswerepreparedattheindicatedtime pointsandsubjectedtowesternblotanalysis.Tubulinwasusedasloadingcontrol.Oneoutofatleastthreeindependentexperimentswithsimilaroutcomeisshown.The meansofrelativeIB␣signalintensitiesfromatleastthreeindependentexperimentswerecalculatedandstatisticallyanalyzedbytwo-wayANOVAwithTukeycorrection;
ns(notsignificant)P>0.05.
retentionofNF-Binthecytoplasm.Thus,anyalterationaffecting theextentorkineticofIB␣degradationwouldimminentlyaffect alldownstreamsignalingevents.pMsfromC57BL/6,L7M−/−,and LMP2−/−micewereincubatedinthepresenceofIFN-␥fortwodays tofurtherupregulateimmunoproteasomeexpression.Degradation ofIB␣wasinducedbystimulatingthecellswiththeTLR4ligand LPSandmonitoredbySDS-PAGEandwesternblotting.Nodiffer- enceinIB␣degradationcouldbedetectedbetweencellsderived fromwildtypeC57BL/6miceandeitherL7M−/−orLMP2−/−mice (Fig.2A).ThesameresultwasobtainedforpMsthatwerenotpre- treatedwithIFN-␥invitro(datanotshown).Inordernottorely onlyonasinglestimulus,pMswerealsostimulatedwithtumor necrosisfactor(TNF)-␣.Duetoadifferentupstreamsignalingcas- cade,receptorbindingofTNF-␣triggersafasterresponsecompared toLPS.Here,maximumIB␣degradationisalreadyreachedafter 15min(Fig.2B).Nevertheless,immunoproteasomedeficiencyhad noapparentinfluenceonIB␣degradation.
SimilartopMs,MEFsstimulatedwithTNF-␣displayedafast response,which is evidenced bytherapid degradationof IB␣
(Fig.2C).AlthoughMEFswerepre-stimulatedwithIFN-␥toupreg- ulateimmunoproteasomeexpression,IB␣degradationwasnot influencedbyeitherLMP7andMECL-1orLMP2deficiency.Even thoughincorporationofimmunoproteasomesubunitsaltersthe cleavagespecificityandsubstratebindingpocketsofthe20Score
particle(Huberetal.,2012;Toesetal.,2001)thereseemstobeno influenceofthesesubunitsonthedegradationofIB␣.
3.3. NucleartranslocationoffreeNF-Bandtransactivationof targetgenesisnormalinimmunoproteasomeknockoutcells
The final steps in NF-Bsignaling are nuclear translocation offreeNF-Bdimersandtransactivationoftargetgenes.Totest whethertheimmunoproteasomehasanyinfluenceonNF-Bsig- nalingdownstreamofIB␣,activenuclearNF-Bwasquantified usinganelectrophoreticmobilityshiftassay(EMSA).MEFsderived fromC57BL/6,L7M−/−,andLMP2−/−micewereincubatedinthe presenceofIFN-␥fortwodaysfollowedbystimulationwithTNF-
␣.Nuclearextractswerepreparedafterdifferenttimepointsand subjectedtoEMSAusinganNF-Bbindingsiteprobe(Fig.3A).As expectedfromtheresultsobtainedforIB␣degradation,nodif- ferenceintheamountofactiveNF-Bcouldbedetectedbetween wildtypeandimmunoproteasomeknockoutcelllines.Likewise, theamountofp65boundtooligonucleotidecontaininganNF-B consensussequenceasdeterminedbyELISAdidnotdifferinthese nuclearextractsatanytimepointafterstimulation(Fig.3B).
Cytokinesmediateimportanteffectorfunctionsoftheimmune system. Hence, many genes encoding cytokines contain NF-B responsiveelementsintheirpromotorregion.Asa measurefor
Fig.3. NucleartranslocationoffreeNF-B.MEFsisolatedfromC57BL/6,L7M−/−, andLMP2−/−micewereculturedinthepresenceof200U/mlIFN-␥for2days.Cells werethenstimulatedwith100U/mlTNF-␣fortheindicatedtimeperiods.Nuclear extractswerepreparedandanalyzedbyelectrophoreticmobilityshiftassay(EMSA) usinganNF-Bbindingsiteprobe(A)orTransAM® NF-BELISA(ActiveMotif) employinganti-p65antibody(B).(A)Asaloadingcontrol,nuclearextractswerealso subjectedtowesternblot(WB)analysisusingananti-LaminA/Cantibody.Oneout ofthreeindependentexperimentswithsimilaroutcomeisshown.(B)Thegraph showspooleddatafromthreeindependentexperimentsincludingmean;ns(not significant)P>0.05(two-wayANOVAwithTukeycorrection).
transactivation,secretionofthepro-inflammatorycytokinesTNF-
␣andIL-6aswellastheanti-inflammatorycytokineIL-10byIFN-␥
–pre-conditionedandLPS-stimulatedpMswasquantifiedusing ELISA(Fig.4).Concentrationsof noneof thecytokinesdiffered inastatisticallysignificantwaybetweensupernatantsofpMs derived fromC57BL/6,L7M−/−,and LMP2−/− mice.Thus,NF-B mediatedtransactivationisnotinfluencedbyimmunoproteasome deficiency.
Overall,IBdegradation andsignaling eventsfurtherdown- streamofthissteparenotinfluencedbytheimmunoproteasome subunitsLMP7,MECL-1,andLMP2.Collectively,thesedatastrongly supportamodelofNF-Bactivationbeingindependentofthe20S proteasomesubunitcomposition.
4. Discussion
Two decades of immunoproteasome research solidified the hypothesis of immunoproteasome particles shaping the immunopeptideomepresentedonMHCclassImolecules(Basler etal.,2011;Basleretal.,2006;Basleretal.,2004;Kincaidetal., 2012;Mishtoetal.,2014;Moreletal.,2000;Osterlohetal.,2006;
Sijtsetal.,2000;Toesetal.,2001).Moreover,itbecameevident thattheimmunoproteasomehas,apartfromantigenprocessing,
Fig.4.TransactivationofNF-Btargetgenes.pMsisolatedfromC57BL/6,L7M−/−, andLMP2−/−micewereculturedinthepresenceof200U/mlIFN-␥for2days.Cells werethenstimulatedwith200ng/mlLPSfor20horleftuntreated(control).Super- natantswerecollectedandconcentrationsofcytokinesTNF-␣,IL-6,andIL-10were determinedbyELISAintriplicates.Graphsshowpooleddatafromatleastfive independentexperimentsincludingmean;ns(notsignificant)P>0.05(unpaired two-tailedStudent´ısttest).
additional immunological functions. Immunoproteasome defi- ciency or inhibition affects T cell survival, expansion, and differentiation (Basler et al., 2004; Chen et al., 2001; Kalim etal.,2012;Moebiusetal.,2010;Muchamueletal.,2009;Zaiss etal.,2008),cytokineproduction(Basleretal.,2011;Basleretal., 2010;Basleretal.,2014;Muchamueletal.,2009),andprogression ofautoimmuneconditions(Basleretal.,2015).Moreover,muta- tionsinLMP7andLMP2inhumanscausecomplexautoimmune andinflammatoryphenotypes(BrehmandKruger,2015;Brehm et al.,2015).The impactof theimmunoproteasomeonvarious immunologicalaspectsrenderedthiscomplexanemergingphar- macolocigaltargetforvariousdiseasesandraisedanevenhigher interest in understandingits exact cellular functionin autoim- munityandinflammation.SinceNF-Bisamasterswitchinthe initiation and maintenance of inflammation, it is of particular interesttoclarifywhetheralteredNF-Bsignaltransductionisthe underlyingmechanismoftheobservedphenomena.
Inourstudy,theexpressionofdifferentproteasomesubunits wasfirst determined by SDS-PAGE and westernblotting. After stimulationwithIFN-␥,bothpMsandMEFsexpressedimmuno- proteasomes. Still, expression of constitutive subunits was not completelydownregulated indicating a mix of constitutive and immunoproteasomes present in the cells. Due tothe assembly defectinL7M−/−cellstheparticlespresentarealmostexclusively composedofconstitutivesubunits.Incontrast,LMP2−/−cellsseem toexpressLMP7butduetothedefectinMECL-1incorporationmost likelycontainconstitutiveproteasomesaswellasmixedparticles containing1,2,andLMP7.
Oneofthebest-studiedsignaltransductionpathwaysultimately dependingontheproteasomeistheNF-Bpathway.Here,protea- somesarerequiredfortheprocessingofNF-Bprecursorsaswell asforthesignal-induceddegradationofIB␣.Theliteratureabout theroleoftheimmunoproteasomeinNF-Bactivationisquitecon- troversial.AnearlystudyperformedwithsplenocytesfromBALB/c, NOD,andLMP2−/−micebyHayashiandFaustmansuggestedthat spleencellsfromNODmicelackLMP2andthatLMP2isrequired fortheprocessingoftheNF-Bp50subunitfromthep105precur- sorandforthedegradationofIB(HayashiandFaustman,1999).
Thelatternotionwassubsequentlyconfirmedbythesameauthors in theLMP2/LMP7 double deficient human lymphoblastoidcell lineT2whenthismutantwascomparedtotheLMP2/LMP7profi- cientparentalcelllineT1(HayashiandFaustman,2000).However, twoindependentgroupscouldnotconfirmalowerexpressionof LMP2mRNAorproteininNODascomparedtoBALB/csplenocytes.
(Kessleretal.,2000;Runnelsetal.,2000).Moreover,areconstitu- tionofT2cellswithLMP2and/orLMP7didnotchangethequantity ofthematurep50subunitof NF-B(Runnelsetal., 2000).The follow-upstudybyHayashiandFaustmanalsofoundreducedIB␣
degradationinLMP2−/−lymphocytesuponstimulationwithTNF-
␣(HayashiandFaustman,2000).Thisfindingcouldbeconfirmed withLPS-stimulatedBcellsderivedfromLMP2−/−micebyanother group,althoughthe observedeffectwasrather minor(Hensley etal.,2010).Inastudyinvestigatinghumancolitis,Visekrunaetal.
showedenhancedprocessingofp105top50incytosolicextracts fromthecolonicmucosa ofpatients withCrohn’sdisease(CD), whichexpressedhigherlevelsofimmunoproteasome,ascompared tomucosalextractsfrompatientswithulcerativecolitis(UC)con- taininglessimmunoproteasome(Visekrunaetal.,2006).However, thisfindingwasmerelycorrelativeanditcouldnotberuledoutthat otherfactorsthatdifferintheCDandUCextractsaccountedfordif- ferentp105processingrates.Thesamestudyalsofoundenhanced invitrodegradationofIB␣inthepresenceofpurified20Simmuno- proteasomes compared toconstitutive proteasomes. While free IB␣canindeedbedegradedinaubiquitin-independentfashion (Mathesetal.,2008)thisdegradationpathwaymightnotberep- resentativeforthecanonicalubiquitin-dependentdegradationof NF-B-boundIB␣viathe26Sproteasome.Incontrast,arecent reportbyMaldonadoandcolleaguesfoundthatactivationofthe canonicalpathwaywasnotaffectedinLMP2−/−andL7M−/−cells whilethealternativepathwayseemedtobe“aberrant”inLMP2−/−
cells(Maldonadoetal.,2013).Furthermore,ithasbeenproposed thattheimmunoproteasomehasahighercapacitytoclearubiqui- tylatedproteinsaccumulatingafterstimulationwithIFN-␥(Seifert etal.,2010).However,thisfindingtoocouldnotbereproduced by others (Nathanet al.,2013; Kincaid et al., 2012).Unlike in thepreviousstudies,weusedtwodifferenttypesofprimarycells directlyderivedfromknockoutmice.BychoosingpMsandMEFs weincludedcellsfromhematopoieticandnon-hematopoieticori- gin,respectively,andourexperimentscouldnotbecomplicated bypotentialdifferencesinthedistributionoflymphocytesubpop- ulationsthatoccurinimmunoproteasomeknockoutmice(Basler etal.,2006;VanKaeretal.,1994).Thus,theavoidanceofhighly
specializedcelltypes,totallymphocytes,andgeneticallymodified celllinesfurtherstrengthensourdataset.
Inconclusion,theresultspresentedinourstudyclearlyargue againstaninfluenceofimmunoproteasomesonthecanonicalpath- wayofNF-BactivationatleastinMEFsandpMs.Twodifferent typesofprimarycellspreparedfromLMP2−/−,L7M−/−,andwild type micedisplayednodifferencesin theextentandkinetic of IB␣ degradation when stimulatedwithLPS or TNF-␣. Consis- tentwiththisfinding,theamountofactiveNF-Binthenucleus ofknockoutcellsaswellasthetransactivationactivitywasnor- mal.Althoughgenerationofp50fromthep105precursorwasnot analyzedhere,ourresultsdonotindicateadeficitinmaturedNF-
Bsubunitsintheknockoutcells.Astudyconductedwithsmall moleculeinhibitorstargetingLMP2orLMP7furthersupportsthe conceptionofNF-Bactivationbeingindependentofproteasome composition.InhibitionofLMP2,LMP7,orevenbothhadnoinflu- enceonIB␣degradation incells stimulatedwithTNF-␣(Jang et al., 2012). Given that neither geneticdeletion nor chemical inhibition ofimmunoproteasomesubunitsaffects canonicalNF-
Bactivation,theelucidationofalternativemechanismshowthe immunoproteasomeinfluencescytokineproduction,Thelpercell differentiation,and autoimmunity requires substantialresearch effortsinthefuture.
Conflictofinterest
Theauthorsdeclarenoconflictsofinterest.
Funding
ThisworkwassupportedbygrantsBA4199/2-1andGR1517/14- 1fromtheGermanResearchFoundation(DFG).A.B.wasamember oftheDFGResearchTrainingGroup1331.Thefundershadnorolein thestudydesign,norinthecollection,analysis,andinterpretation ofthedata,writingofthereport,anddecisiontosubmitthearticle forpublication.
Acknowledgements
WethankM.VincendeauforhelpwithEMSAsandG.Schmidtke forhelpwithradioactivework.
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