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Figure S1. Construction of the lncRNA overexpression plasmids.

Figure S2. Scatter plots of the microarray data (recurrent vs primary).

Figure S3. The level of the three not-researched lncRNAs (HERH-2, HERH-3 and LERH-1) in HCC recurrent (RE) and primary (PR) tissues were detected by qRT-

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PCR.

Figure S4. Artificial intervention of HERH-1 and HERH-4 levels in HCC cell lines.

The HERH-1/4 levels were detected by qRT-PCR. **P < 0.01; NC, negative control.

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Figure S5. Regulation of the selected cell cycle associated genes by siRNA (siR) mediated knockdown or eukaryotic expression plasmid (pcDNA3) induced expression of HERH-1/4 in HCC cell lines. The mRNA levels of BUB1, CDCA5, CDKN3 and CENPF were detected by qRT-PCR. *P < 0.05; **P < 0.01; NC, negative control;

n.s., not significant.

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Figure S6. Plasmid based CREB1 protein overexpression in HCC cell lines. The CREB1 protein level was detected by Western blot assay. Full-length blots are presented in Fig. S8h. *P < 0.05

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Figure S7. Intervention of miR-29b/c in HCC cell lines. The miR-29b/c levels were detected by qRT-PCR. ASO, antisense oligonucleotide; NC, negative control; *P <

0.05; **P < 0.01

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Figure S8. The uncropped full-length Western blots for Fig. 3h (a), Fig. 4b (b), Fig.

5e (c, d), Fig. 5g (e–g), and Fig. S6 (h) are shown.

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Figure S9. The uncropped full-length DNA electrophoresis gels for Fig. 3i (a, b) and Fig. 5i (c, d) are shown. The arrows indicate the target bands.

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