Comparative analysis of the complete mitochondrial genome sequences and anther development cytology between maintainer and Ogura-type cytoplasm male-sterile cabbage (B. oleracea Var. capitata)
Xionghui Zhong 1 , Denghui Chen 1, 2 , Jian Cui 1 , Hailong Li 1 , Yuxin Huang 1 , Jungen Kang 1, *
* Correspondence: kangjungen@nercv.org;
1 Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), Ministry of Agriculture, Beijing 100097, P.R. China
2 College of Horticulture, Gansu Agricultural University, Lanzhou 730070, P.R.
China;
120 B.oleracea_mitochondrial_gene_orf138_complete_cds in this study
120 AB055435.1_R.sativus_mitochondrial_gene_orf138_haplotype:A
120 AB055436.1_R.sativus_mitochondrial_gene_orf138_haplotype:B
120 AB055437.1_R.sativus_mitochondrial_gene_orf138_haplotype:C
120 AB055438.1_R.sativus_mitochondrial_gene_orf138_haplotype:D
120 AB055439.1_R.sativus_mitochondrial_gene_orf138_haplotype:E
120 AB055440.1_R.sativus_mitochondrial_gene_orf138_haplotype:F
120 AB055441.1_R.sativus_mitochondrial_gene_orf138_haplotype:G
120 AB055442.1_R.sativus_mitochondrial_gene_orf138_haplotype:H
120 AB055443.1_R.sativus_mitochondrial_gene_orf138_haplotype:I
Consensus a
AA AA A AA AA A t TT TT T TT TT T g GG GG G GG GG G a AA AA A AA AA A t TT TT T TT TT T t TT TT T TT TT T AA AA C CA AA A c CC CC C CC CC C c CC CC C CC CC C t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T c CC CC C CC CC C g GG GG G GG GG G a AA AA A AA AA A a AA AA A AA AA A a AA AA A AA AA A a AA AA A AA AA A a AA AA A AA AA A t TT TT T TT TT T t TT TT T TT TT T g GG GG G GG GG G t TT TT T TT TT T c CC CC C CC CC C c CC CC C CC CC C a AA AA A AA AA A c CC CC C CC CC C t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T g GG GG G GG GG G t TT TT T TT TT T c CC CC C CC CC C a AA AA A AA AA A t TT TT T TT TT T a AA AA A AA AA A a AA AA A AA AA A t TT TT T TT TT T c CC CC C CC CC C t TT TT T TT TT T c CC CC C CC CC C a AA AA A AA AA A c CC CC C CC CC C t TT TT T TT TT T c CC CC C CC CC C c CC CC C CC CC C t TT TT T TT TT T a AA AA A AA AA A c CC CC C CC CC C t TT TT T TT TT T g GG GG G GG GG G a AA AA A AA AA A a AA AA A AA AA A t TT TT T TT TT T g GG GG G GG GG G t TT TT T TT TT T AA AA A AA AC A a AA AA A AA AA A a AA AA A AA AA A g GG GG G GG GG G t TT TT T TT TT T t TT TT T TT TT T a AA AA A AA AA A g GG GG G GG GG G t TT TT T TT TT T g GG GG G GG GG G t TT TT T TT TT T a AA AA A AA AA A a AA AA A AA AA A t TT TT T TT TT T a AA AA A AA AA A a AA AA A AA AA A g GG GG G GG GG G t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T c CC CC C CC CC C t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T c CC CC C CC CC C t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T AA AA A AA CA A g GG GG G GG GG G c CC CC C CC CC C t TT TT T TT TT T t TT TT T TT TT T TT TA T AA TT A t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T AA GG A GG GG G c CC CC C CC CC C t TT TT T TT TT T a AA AA A AA AA A a AA AA A AA AA A t TT TT T TT TT T g GG GG G GG GG G g GG GG G GG GG G c CC CC C CC CC C c CC CC C CC CC C c CC CC C CC CC C a AA AA A AA AA A t TT TT T TT TT T a AA AA A AA AA A t TT TT T TT TT T t TT TT T TT TT T t TT TT T TT TT T g GG GG G GG GG G g GG GG G GG GG G c CC CC C CC CC C t TT TT T TT TT T a AA AA A AA AA A
240 B.oleracea_mitochondrial_gene_orf138_complete_cds in this study
240 AB055435.1_R.sativus_mitochondrial_gene_orf138_haplotype:A
240 AB055436.1_R.sativus_mitochondrial_gene_orf138_haplotype:B
240 AB055437.1_R.sativus_mitochondrial_gene_orf138_haplotype:C
240 AB055438.1_R.sativus_mitochondrial_gene_orf138_haplotype:D
240 AB055439.1_R.sativus_mitochondrial_gene_orf138_haplotype:E
240 AB055440.1_R.sativus_mitochondrial_gene_orf138_haplotype:F
240 AB055441.1_R.sativus_mitochondrial_gene_orf138_haplotype:G
240 AB055442.1_R.sativus_mitochondrial_gene_orf138_haplotype:H
240 AB055443.1_R.sativus_mitochondrial_gene_orf138_haplotype:I
Consensus a
A AA AA A AA AA g G GG GG G GG GG c C CC CC C CC CC t T TT TT T TT TT g G GG GG G GG GG g G GG GG G GG GG t T TT TT T TT TT t T TT TT T TT TT t T TT TT T TT TT t T TT TT T TT TT c C CC CC C CC CC t T TT TT T TT TT a A AA AA A AA AA a A AA AA A AA AA c C CC CC C CC CC a A AA AA A AA AA a A AA AA A AA AA c C CC CC C CC CC c C CC CC C CC CC a A AA AA A AA AA a A AA AA A AA AA c C CC CC C CC CC a A AA AA A AA AA t T TT TT T TT TT t T TT TT T TT TT g G GG GG G GG GG t T TT TT T TT TT t T TT TT T TT TT t T TT TT T TT TT a A AA AA A AA AA c C CC CC C CC CC g G GG GG G GG GG a A AA AA A AA AA a A AA AA A AA AA c C CC CC C CC CC c C CC CC C CC CC a A AA AA A AA AA t T TT TT T TT TT g G GG GG G GG GG a A AA AA A AA AA g G GG GG G GG GG a A AA AA A AA AA c C CC CC C CC CC a A AA AA A AA AA t T TT TT T TT TT c C CC CC C CC CC t T TT TT T TT TT a A AA AA A AA AA g G GG GG G GG GG a A AA AA A AA AA g G GG GG G GG GG a A AA AA A AA AA a A AA AA A AA AA g G GG GG G GG GG t T TT TT T TT TT t T TT TT T TT TT a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT t T TT TT T TT TT c C CC CC C CC CC c C CC CC C CC CC a A AA AA A AA AA t T TT TT T TT TT a A AA AA A AA AA t T TT TT T TT TT g G GG GG G GG GG a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT t T TT TT T TT TT t T TT TT T TT TT c C CC CC C CC CC a A AA AA A AA AA g G GG GG G GG GG t T TT TT T TT TT a A AA AA A AA AA t T TT TT T TT TT g G GG GG G GG GG g G GG GG G GG GG g G GG GG G GG GG t T TT TT T TT TT g G GG GG G GG GG g G GG GG G GG GG c C CC CC C CC CC t T TT TT T TT TT a A AA AA A AA AA g G GG GG G GG GG g G GG GG G GG GG t T TT TT T TT TT g G GG GG G GG GG t T TT TT T TT TT c C CC CC C CC CC a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT t T TT TT T TT TT a A AA AA A AA AA c C CC CC C CC CC a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT c C CC CC C CC CC a A AA AA A AA AA a A AA AA A AA AA a A AA AA A AA AA t T TT TT T TT TT g G GG GG G GG GG t T TT TT T TT TT a A AA AA A AA AA
360 B.oleracea_mitochondrial_gene_orf138_complete_cds in this study
360 AB055435.1_R.sativus_mitochondrial_gene_orf138_haplotype:A
360 AB055436.1_R.sativus_mitochondrial_gene_orf138_haplotype:B
360 AB055437.1_R.sativus_mitochondrial_gene_orf138_haplotype:C
360 AB055438.1_R.sativus_mitochondrial_gene_orf138_haplotype:D
360 AB055439.1_R.sativus_mitochondrial_gene_orf138_haplotype:E
360 AB055440.1_R.sativus_mitochondrial_gene_orf138_haplotype:F
360 AB055441.1_R.sativus_mitochondrial_gene_orf138_haplotype:G
360 AB055442.1_R.sativus_mitochondrial_gene_orf138_haplotype:H
360 AB055443.1_R.sativus_mitochondrial_gene_orf138_haplotype:I
Consensus c
C CC C CC C CC Cc
C CC C CC C CC Ct
T TT T TT T TT Ta
A AA A AA A AA Aa
A AA A AA A AA Ac
C CC C CC C CC Cg
G GG G GG G GG Ga
A AA A AA A AA At
T TT T TT T TT Tg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Gt
T TT T TT T TT Tg
G GG G GG G GG Ga
A AA A AA A AA Ac
C CC C CC C CC Cg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Gt
T TT T TT T TT Tc
C CC C CC C CC Ct
T TT T TT T TT Tc
C CC C CC C CC Ca
A AA A AA A AA Ac
C CC C CC C CC Cc
C CC C CC C CC Ct
T TT T TT T TT Ta
A AA A AA A AA At
T TT T TT T TT Tc
C CC C CC C CC Ca
A AA A AA A AA At
T TT T TT T TT Tt
T TT T TT T TT Ta
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA At
T TT T TT T TT Ta
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA A T TT T TT T TT Aa
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG Ga
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Aa
A AA A AA A AA Ag
G GG G GG G GG Ga
A AA A AA A AA Ag
G GG G GG G GG Gg
G GG G GG G GG G G GG G GG T GG Gg
G GG G GG G GG G A AA A AA G AA Aa
A AA A AA A AA Aa
A AA A AA A AA A
416 B.oleracea_mitochondrial_gene_orf138_complete_cds in this study
416 AB055435.1_R.sativus_mitochondrial_gene_orf138_haplotype:A
416 AB055436.1_R.sativus_mitochondrial_gene_orf138_haplotype:B
416 AB055437.1_R.sativus_mitochondrial_gene_orf138_haplotype:C
416 AB055438.1_R.sativus_mitochondrial_gene_orf138_haplotype:D
416 AB055439.1_R.sativus_mitochondrial_gene_orf138_haplotype:E
378 AB055440.1_R.sativus_mitochondrial_gene_orf138_haplotype:F
416 AB055441.1_R.sativus_mitochondrial_gene_orf138_haplotype:G
416 AB055442.1_R.sativus_mitochondrial_gene_orf138_haplotype:H
416 AB055443.1_R.sativus_mitochondrial_gene_orf138_haplotype:I
Consensus
GG GG G GA GG G GG GG G GA GG G GG GG G GT GG G g GG GG G GG GG G AA AA A AG AA A a AA AA A AA AA A AA AA A AC AA A TT TT T TC TT T AA AA A AG AA A GG GG G GA GG G AA AA A AG AA A GG GG G GA GG G GG GG G GA GG G GG GG G GA GG G GG GG G GA GG G AA AA A AT AA A a AA AA A AA AA A a AA AA A AA AA A GG GG G G. GG G AA AA A A. AA A GG GG G G. GG G GG GG G G. GG G AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A GG GG G G. GG G AA AA A A. AA A GG GG G G. GG G GG GG G G. GG G TT TT T T. TT T GG GG G G. GG G GG GG G G. GG G AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A TT TT T T. TT T GG GG G G. GG G GG GG G G. GG G AA AA A A. AA A CC CC C C. CC C CC CC C C. CC C GG GG G G. GG G AA AA A A. AA A GG GG G G. GG G AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A AA AA A A. AA A TT TT T T. TT T AA AA A A. AA A
